BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029F08SP1|AL429092
(887 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1392 1754 0.0
>3x_Contig1392
Length = 9092
Score = 1754 bits (885), Expect = 0.0
Identities = 885/885 (100%)
Strand = Plus / Plus
Query: 3 taacaatagcaagcttaacgatggcaacagcttcgccagtcgtattatcacaatatgatc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5238 taacaatagcaagcttaacgatggcaacagcttcgccagtcgtattatcacaatatgatc 5297
Query: 63 caaccggacaatattttgcatacgtttccaccgctttggataaacagcgggtatcagtgg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5298 caaccggacaatattttgcatacgtttccaccgctttggataaacagcgggtatcagtgg 5357
Query: 123 agccaacaactgcctccaaatctggtttagtgaacgataattttctctatttggagggga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5358 agccaacaactgcctccaaatctggtttagtgaacgataattttctctatttggagggga 5417
Query: 183 aagacgtctgctgtacatgcatacaatggattacttacaatgacacaccattggtagttc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5418 aagacgtctgctgtacatgcatacaatggattacttacaatgacacaccattggtagttc 5477
Query: 243 tgggtctaaacctaggggaaatatggctatactctcctttatcgaatgaaatagtggcga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5478 tgggtctaaacctaggggaaatatggctatactctcctttatcgaatgaaatagtggcga 5537
Query: 303 aactgaacacaggatcaagcttagcagttttagatttccaactcttttcaagcaaggaca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5538 aactgaacacaggatcaagcttagcagttttagatttccaactcttttcaagcaaggaca 5597
Query: 363 aggcctggtgtttgactggtgatgatactatttttttattcgacatggtatcacagaatg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5598 aggcctggtgtttgactggtgatgatactatttttttattcgacatggtatcacagaatg 5657
Query: 423 tatcaaaaaaattcaaaattgatgaatgtaaggacttaaaaaagctatgcatagttgata 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5658 tatcaaaaaaattcaaaattgatgaatgtaaggacttaaaaaagctatgcatagttgata 5717
Query: 483 gcaatcgtattcttgtcgcttctcatcaaatttacttaatcgatgtcatttcaaagaaat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5718 gcaatcgtattcttgtcgcttctcatcaaatttacttaatcgatgtcatttcaaagaaat 5777
Query: 543 tgttgttacaataccctggccatatttcacctgtgtctttccttcaagtgaccacagatg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5778 tgttgttacaataccctggccatatttcacctgtgtctttccttcaagtgaccacagatg 5837
Query: 603 gaacagcatttttgagtgcatctcaggacgatagatttttgaatatttatgatttggaca 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5838 gaacagcatttttgagtgcatctcaggacgatagatttttgaatatttatgatttggaca 5897
Query: 663 ctaccaagactaagtccgtcctagtagcggactcgaacgttatatcaatttcgatatctg 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5898 ctaccaagactaagtccgtcctagtagcggactcgaacgttatatcaatttcgatatctg 5957
Query: 723 aggattggtctcacgtgtcggcaacaacagaagatggggatattgctatctttgaagaac 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5958 aggattggtctcacgtgtcggcaacaacagaagatggggatattgctatctttgaagaac 6017
Query: 783 ctttggtatcaatcaattcagggaataagagacgttctggtaagatatccaaacaaaaaa 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6018 ctttggtatcaatcaattcagggaataagagacgttctggtaagatatccaaacaaaaaa 6077
Query: 843 acaaaactataactttattaaggtctaattccgcaaccagattgc 887
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6078 acaaaactataactttattaaggtctaattccgcaaccagattgc 6122
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7678
Number of Sequences: 1807
Number of extensions: 7678
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 887
length of database: 10,358,551
effective HSP length: 16
effective length of query: 871
effective length of database: 10,329,639
effective search space: 8997115569
effective search space used: 8997115569
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)